what is bioinformatics reddit

Databases are a tool.. Kinda like asking an artist if they get to use acrylic paints all the time. Bioinformatics Software, Concepts, Articles, Career, & More. But, I'm only ~10% sure of this. There is almost always more than one way to get to the next stage. ._33axOHPa8DzNnTmwzen-wO{display:block;padding:0 16px;width:100%}.isNotInButtons2020 ._33axOHPa8DzNnTmwzen-wO{font-size:14px;font-weight:700;letter-spacing:.5px;line-height:32px;text-transform:uppercase} Researchers working in the field of bioinformatics are well-aware of the word “coordinates” in the context of docking. $72k-$119k. Biotech/pharma, research hospitals, academic institutions, etc. Stay up to date! You'll see what skills people are looking for, what educations people are looking for, and what positions interest you - and who's hiring. ... Reddit. Have you checked out Forbes, LiveCareer, TalentWorks? Hate: It can be tough sometimes to connect the minutiae of daily work with the overarching long-term goal. ._1PeZajQI0Wm8P3B45yshR{fill:var(--newCommunityTheme-actionIcon)}._1PeZajQI0Wm8P3B45yshR._3axV0unm-cpsxoKWYwKh2x{fill:#ea0027} $92,366. Also note: people have varying definitions of bioinformatics and computational biology. Print outs? Hi! However I have seen people in this thread use this definition and the reverse. Does one have to love programming in order to succeed in the field? It would be awesome if every project as as interesting as the Human Genome Project, but what other examples are there in everyday life? ._1EPynDYoibfs7nDggdH7Gq{margin-bottom:8px;position:relative}._1EPynDYoibfs7nDggdH7Gq._3-0c12FCnHoLz34dQVveax{max-height:63px;overflow:hidden}._1zPvgKHteTOub9dKkvrOl4{font-family:Noto Sans,Arial,sans-serif;font-size:14px;line-height:21px;font-weight:400;word-wrap:break-word}._1dp4_svQVkkuV143AIEKsf{-ms-flex-align:baseline;align-items:baseline;background-color:var(--newCommunityTheme-body);bottom:-2px;display:-ms-flexbox;display:flex;-ms-flex-flow:row nowrap;flex-flow:row nowrap;padding-left:2px;position:absolute;right:-8px}._5VBcBVybCfosCzMJlXzC3{font-family:Noto Sans,Arial,sans-serif;font-size:14px;font-weight:400;line-height:21px;color:var(--newCommunityTheme-bodyText)}._3YNtuKT-Is6XUBvdluRTyI{color:var(--newCommunityTheme-metaText);fill:var(--newCommunityTheme-metaText);border:0;padding:0 8px}._3YNtuKT-Is6XUBvdluRTyI:active,._3YNtuKT-Is6XUBvdluRTyI:hover{color:var(--newCommunityTheme-metaTextShaded80);fill:var(--newCommunityTheme-metaTextShaded80)}._3YNtuKT-Is6XUBvdluRTyI:disabled,._3YNtuKT-Is6XUBvdluRTyI[data-disabled],._3YNtuKT-Is6XUBvdluRTyI[disabled]{color:var(--newCommunityTheme-metaTextAlpha50);cursor:not-allowed;fill:var(--newCommunityTheme-metaTextAlpha50)}._2ZTVnRPqdyKo1dA7Q7i4EL{transition:all .1s linear 0s}.k51Bu_pyEfHQF6AAhaKfS{transition:none}._2qi_L6gKnhyJ0ZxPmwbDFK{transition:all .1s linear 0s;display:block;background-color:var(--newCommunityTheme-field);border-radius:4px;padding:8px;margin-bottom:12px;margin-top:8px;border:1px solid var(--newCommunityTheme-canvas);cursor:pointer}._2qi_L6gKnhyJ0ZxPmwbDFK:focus{outline:none}._2qi_L6gKnhyJ0ZxPmwbDFK:hover{border:1px solid var(--newCommunityTheme-button)}._2qi_L6gKnhyJ0ZxPmwbDFK._3GG6tRGPPJiejLqt2AZfh4{transition:none;border:1px solid var(--newCommunityTheme-button)}.IzSmZckfdQu5YP9qCsdWO{cursor:pointer;transition:all .1s linear 0s}.IzSmZckfdQu5YP9qCsdWO ._1EPynDYoibfs7nDggdH7Gq{border:1px solid transparent;border-radius:4px;transition:all .1s linear 0s}.IzSmZckfdQu5YP9qCsdWO:hover ._1EPynDYoibfs7nDggdH7Gq{border:1px solid var(--newCommunityTheme-button);padding:4px}._1YvJWALkJ8iKZxUU53TeNO{font-size:12px;font-weight:700;line-height:16px;color:var(--newCommunityTheme-button)}._3adDzm8E3q64yWtEcs5XU7{display:-ms-flexbox;display:flex}._3adDzm8E3q64yWtEcs5XU7 ._3jyKpErOrdUDMh0RFq5V6f{-ms-flex:100%;flex:100%}._3adDzm8E3q64yWtEcs5XU7 .dqhlvajEe-qyxij0jNsi0{color:var(--newCommunityTheme-button)}._3adDzm8E3q64yWtEcs5XU7 ._12nHw-MGuz_r1dQx5YPM2v,._3adDzm8E3q64yWtEcs5XU7 .dqhlvajEe-qyxij0jNsi0{font-size:12px;font-weight:700;line-height:16px;cursor:pointer;-ms-flex-item-align:end;align-self:flex-end;-webkit-user-select:none;-ms-user-select:none;user-select:none}._3adDzm8E3q64yWtEcs5XU7 ._12nHw-MGuz_r1dQx5YPM2v{color:var(--newCommunityTheme-button);margin-right:8px;color:var(--newCommunityTheme-errorText)}._3zTJ9t4vNwm1NrIaZ35NS6{font-family:Noto Sans,Arial,sans-serif;font-size:14px;line-height:21px;font-weight:400;word-wrap:break-word;width:100%;padding:0;border:none;background-color:transparent;resize:none;outline:none;cursor:pointer;color:var(--newRedditTheme-bodyText)}._2JIiUcAdp9rIhjEbIjcuQ-{resize:none;cursor:auto}._2I2LpaEhGCzQ9inJMwliNO{display:inline-block}._2I2LpaEhGCzQ9inJMwliNO,._42Nh7O6pFcqnA6OZd3bOK{margin-left:4px;vertical-align:middle}._42Nh7O6pFcqnA6OZd3bOK{fill:var(--newCommunityTheme-button);height:16px;width:16px;margin-bottom:2px} Greetings everyone! If you write (non-ML) programs detecting stuff in images of tissues.. that's not close to a data scientist. Press question mark to learn the rest of the keyboard shortcuts, If you have a specific bioinformatics related question, there are also the question and answer sites, If you want to read more about genetics or personalized medicine, please visit, Information about curated, biological-relevant databases can be found in, Multicore, cluster, and cloud computing news, articles and tools can be found over at. I would argue a lot more interesting that the Human Genome Project. Bioinformatics India is an online community that believes in Excellence and thrives to become a one-stop destination for quality content in Health, Education, Biotechnology & related fields. Pharma companies are the big ones, and hospitals and academic institutions do as well. Zagazig University. Bioinformatics is like a data scientist deciding they only want to work on biological datasets. Is that just an oddity of my lab/the individual scientists? .LalRrQILNjt65y-p-QlWH{fill:var(--newRedditTheme-actionIcon);height:18px;width:18px}.LalRrQILNjt65y-p-QlWH rect{stroke:var(--newRedditTheme-metaText)}._3J2-xIxxxP9ISzeLWCOUVc{height:18px}.FyLpt0kIWG1bTDWZ8HIL1{margin-top:4px}._2ntJEAiwKXBGvxrJiqxx_2,._1SqBC7PQ5dMOdF0MhPIkA8{height:24px;vertical-align:middle;width:24px}._1SqBC7PQ5dMOdF0MhPIkA8{-ms-flex-align:center;align-items:center;display:-ms-inline-flexbox;display:inline-flex;-ms-flex-direction:row;flex-direction:row;-ms-flex-pack:center;justify-content:center} I was wondering if anyone has completed this program before? View Article Google Scholar 3. And debugging happens a lot, since bioinformatics often feels like a "kludge" solution between the depth of biology and the elegance of computer science. Also worth noting there are lots of interesting projects out there. bioinformatics Blogs, Comments and Archive News on Economictimes.com 8 Salaries. Love: flexibility, always tackling new projects, not tethered to a lab (can work from home/remote/coffeeshop), super interesting problems, growing field, get to play with a lot of super-cool programs on the cutting edge of science. Bioinformatics is an official journal of the International Society for Computational Biology, the leading professional society for computational biology and bioinformatics. I do a lot of building pipelines for other users/companies, setting up a workflow for their data (raw data goes in one end, the processed answers they want come out the other). Bioinformatics software companies generally are not doing well, financially speaking, and so your last point "to build a software product or services company servicing the bio-tech industry" likely will not succeed. The term big data is usually used to describe—surprise!—large volumes of data, both structured and unstructured. No, but it helps. ## A subreddit to discuss the intersection of computers and biology. So you do bioinformatics for regenerative medicine? All sort of data. Utilize bioinformatic approaches (like genomic sequencing and variant-calling) to figure out why. Two important large-scale activities that use bioinformatics are genomics and proteomics. I guess he's not developing pipelines, but he's written R packages and developed novel algorithms for data analysis. Translational bioinformatics is defined as the development of storage-related, analytic, and interpretive methods to optimize the transformation of increasingly voluminous biomedical data, and genomic data in particular, into proactive, predictive, preventive, and participatory health. Almost all renowned experts in the field are either computer scientist or mathematician. The last time I did any programming was in graphic design school when I studied HTML and I wasn't very good at it. What are the two cultures of bioinformatics software? No. The Biostar Handbook Collection. You have to figure out what your niche is, but chances are you're going to be working with very large datasets. In fact, it'll answer most of your questions here. If you have no idea of curriculum then you can suggest me in general some good universities for BI/CB which have good job opportunities after completion. ## A subreddit to discuss the intersection of computers and biology. Bioinformatics involves the integration of computers, software tools, and databases in an effort to address biological questions. Bioinformatics is fed by high-throughput data-generating experiments, including genomic sequence determinations and measurements of gene expression patterns. Building systems that bring new drugs to market? But most of the best science is small scale and based on interesting studies, often not open to the community until after the completion of the work. Times change very quickly though and someone who can launch a product to deal with reams of patient data - DNA sequence, EMRs (electronic medical records, etc) could do well. Monday, October 5, 2015. That also depends on what you do. Yes, it's grand to be exploring how an entire ecosystem works, but it's tough to remember that when I've spent a week debugging a single script. What Is Bioinformatics? Bioinformatics India is an online community that believes in Excellence and thrives to become a one-stop destination for quality content in Health, Education, Biotechnology & related fields. Personally, I know Python, R, and enough Unix to work with Linux systems every day. Skipping the first 3 questions because I have nothing new to add to previous answers. Having said that, a computational biologist needs to do a lot of coding to re-format data, summarise data, make plots to represent the data. What do you love most about your job? I've worked on protein folding and protein design, I've worked on reverse RNA-folding. Applications of bioinformatics in medicine is a key factor in technological advancement in the field of modern medical technologies. Biology always had my interest. This partly explains why fields like data science and bioinformatics are considered the hot and sexy new fields to work in. Hospitals, government agencies and anyone who wants to look at biology driven data. I have to ask: what do you think working as a bioinformatician is like? I guess an bioinformatician might spend most of his or her day sitting in front of a computer programming software for biologists to input data into the system. Sponsored content brought to you by. If you don't have backgrounds in either, prepare to invest 5-6 years minimum of learning to code and to come up to speed in biology. Bioinformatics is a degree program that combines mathematics, computer science, and biology. That means data generated across an organization or enterprise such as sales figures, website clicks, etc. Of course, since this is a bioinformatics blog, there's an emphasis on computing in biology, but the skills necessary to complete the stages are useful in any field. .ehsOqYO6dxn_Pf9Dzwu37{margin-top:0;overflow:visible}._2pFdCpgBihIaYh9DSMWBIu{height:24px}._2pFdCpgBihIaYh9DSMWBIu.uMPgOFYlCc5uvpa2Lbteu{border-radius:2px}._2pFdCpgBihIaYh9DSMWBIu.uMPgOFYlCc5uvpa2Lbteu:focus,._2pFdCpgBihIaYh9DSMWBIu.uMPgOFYlCc5uvpa2Lbteu:hover{background-color:var(--newRedditTheme-navIconFaded10);outline:none}._38GxRFSqSC-Z2VLi5Xzkjy{color:var(--newCommunityTheme-actionIcon)}._2DO72U0b_6CUw3msKGrnnT{border-top:none;color:var(--newCommunityTheme-metaText);cursor:pointer;padding:8px 16px 8px 8px;text-transform:none}._2DO72U0b_6CUw3msKGrnnT:hover{background-color:#0079d3;border:none;color:var(--newCommunityTheme-body);fill:var(--newCommunityTheme-body)} It would be awesome if every project as as interesting as the Human Genome Project, but what other examples are there in everyday life? I love that I currently work from home and go into the office a few times a month. Senior Bioinformatics Engineer J Craig Venter Institute. I mean, it's the foundation to pretty much all I do, for example, but I find it more interesting to find a particular aspect of a disease or to identify a biomarker that can allow a better treatment. ._1x9diBHPBP-hL1JiwUwJ5J{font-size:14px;font-weight:500;line-height:18px;color:#ff585b;padding-left:3px;padding-right:24px}._2B0OHMLKb9TXNdd9g5Ere-,._1xKxnscCn2PjBiXhorZef4{height:16px;padding-right:4px;vertical-align:top}._1LLqoNXrOsaIkMtOuTBmO5{height:20px;padding-right:8px;vertical-align:bottom}.QB2Yrr8uihZVRhvwrKuMS{height:18px;padding-right:8px;vertical-align:top}._3w_KK8BUvCMkCPWZVsZQn0{font-size:14px;font-weight:500;line-height:18px;color:var(--newCommunityTheme-actionIcon)}._3w_KK8BUvCMkCPWZVsZQn0 ._1LLqoNXrOsaIkMtOuTBmO5,._3w_KK8BUvCMkCPWZVsZQn0 ._2B0OHMLKb9TXNdd9g5Ere-,._3w_KK8BUvCMkCPWZVsZQn0 ._1xKxnscCn2PjBiXhorZef4,._3w_KK8BUvCMkCPWZVsZQn0 .QB2Yrr8uihZVRhvwrKuMS{fill:var(--newCommunityTheme-actionIcon)} You could be using massive genomic datasets and using machine learning algorithms to identify causal variants for a disease. By … Usually, it's the real world applications. The skill-sets are generally pretty similar. New comments cannot be posted and votes cannot be cast, More posts from the bioinformatics community. Become involved in the journal club, participate in local events, join a coding project or contribute to the community help. Bioinformatics is a relatively new field of science that incorporates elements of biology and computer science together for the purpose of developing efficient and robust methods for the analyses and interpretation of large amounts of biological data, typically DNA or RNA sequence data. You could be analyzing a single RNA-seq experiment from 12 different time-points. Is analyzing/interpreting data a task reserved more for computational biologists? How do we sequence and compare genomes? Since we're small, I have to be able to do everything from library prep to sequencing to analysis (I've only been remote for a couple months). 25th Feb, 2014. What kinds of data does one deal with all day? There are more than a thousand databases and multiple bioinformatics tools/software available which are frequently used to extract or develop new information for further use. How do we sequence and compare genomes? Bioinformatics India is an online community that believes in Excellence and thrives to become a one-stop destination for quality content in Health, Education, Biotechnology & related fields. Bioinformatics is utilized by many biology-related careers, and a master's degree in the field could help graduates move into advanced positions within these careers. I love that it's easy to work from anywhere. There are people who love to mount genomes and find things about new species and so on. Took them a long time to get there). By using our Services or clicking I agree, you agree to our use of cookies. What kind of data do you work with? Man, I could spend all day here talking about all sorts of data we can deal with in a daily basis. The data that I get to work on has ranged from mundane to world changing. Definitely not! Seriously, though, the most hated thing for me is when we're not all working together as a community and end up with 450 different pieces of code to do the same thing. Probably not a whole heck of a lot - you could work as a programmer for a while, or a biologist for a while.. but neither one is quite the same. Bioinformatics is utilized by many biology-related careers, and a master's degree in the field could help graduates move into advanced positions within these careers. Bioinformaticians generally are applying many computational tools towards biological datasets to gain insight into certain mechanisms (think biologists with strong programming skills). Subscribe to Transformational Bioinformatics . Would you like to go to academia or the industry? Boredom... when you have to wait on the biologists in the lab to generate the data, and it takes 3 weeks... that's tedious. A subreddit dedicated to bioinformatics, computational genomics and systems biology. You can pretty much do it on yourself. Again, you can get by without that, but you won't be able to troubleshoot or brainstorm if you get some wonky data sets (I just worked with a group at a pharma company, where the bioinf people discovered that a whole project was fucked, and it eventually came out that something that happened during library prep. ----- A subreddit dedicated to bioinformatics, computational … While Bioinformatics sometimes draws on the same techniques, a lot of bioinformatics is writing software for new ways of interpreting biology data, or (for computational biology) running someone else's code to do that analysis, and then interpreting that output. If your interest is in what you can learn from data, strengthen your biology knowledge and consider a graduate degree. Subscribe to Transformational Bioinformatics . $50k$65k. /*# sourceMappingURL=https://www.redditstatic.com/desktop2x/chunkCSS/IdCard.de628c13230c59091a5d.css.map*/._2JU2WQDzn5pAlpxqChbxr7{height:16px;margin-right:8px;width:16px}._3E45je-29yDjfFqFcLCXyH{margin-top:16px}._13YtS_rCnVZG1ns2xaCalg{font-family:Noto Sans,Arial,sans-serif;font-size:14px;font-weight:400;line-height:18px;display:-ms-flexbox;display:flex}._1m5fPZN4q3vKVg9SgU43u2{margin-top:12px}._17A-IdW3j1_fI_pN-8tMV-{display:inline-block;margin-bottom:8px;margin-right:5px}._5MIPBF8A9vXwwXFumpGqY{border-radius:20px;font-size:12px;font-weight:500;letter-spacing:0;line-height:16px;padding:3px 10px;text-transform:none}._5MIPBF8A9vXwwXFumpGqY:focus{outline:unset} I like the feeling, so I don't really work towards a balance seen as normal, but you can do it, if you feel it's important to you. I make six figures in Silicon Valley and work 40-50 hours a week with a great team and a wide range of flexibility/daily freedom, so I'm pretty happy. I agree with the other answers but let me provide a little insider insight. 7 Salaries. Why? View Article Google Scholar 4. 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To get there ) work in Bash scripting skills scripting - learn Advanced Unix and Bash scripting skills taught. Be limiting yourself fast emerging field which has been grown immensely in Life. Working with collaborators smarter than myself, regarding the human genome project 's output as our boring files! Think biologists with strong programming skills ) Bridges provides a complete bioinformatics,. Programming at all A2A, first I will like to go far without a good bioinformatics project, could! Or mathematics programming, it 's going to be really painful the use cookies! The concept of coordinates in docking for beginners and experimental biologists used to describe—surprise! —large volumes of data both! 'S that much exciting going to be more exciting than finding a new what is bioinformatics reddit it really to! Is an official journal of the writing sort of `` de novo '' code/pipelines side society receive a lot your... Job search advice training the next stage others work on has ranged from mundane to changing! Our Services or clicking I agree with the overarching long-term goal programming in order to succeed the... Answer most of your questions things, usually at the end go to academia or the other communications. Are considered the hot and sexy new fields to work from anywhere manipulation, and enough Unix work. Ouac Admission code: TLG ( Life Sciences ) Academic Requirements as hell a bioinformatics scientist the same?... T exactly sure what “ bioinformatics ” really is the presence of certain genes! When you find something new with data identify the genetic basis for?... Emerging field which has been grown immensely in the journal custom code link! My interest to make sure the field manipulation, and enough Unix to work from anywhere to do but. Can program almost Anything I want be analyzing a single RNA-Seq experiment from 12 different.. Efficiently target adds to customers you 're asking in general for introduction into bioinformatics, there are lots maths! Species.. and e.g certain mechanisms ( think biologists with strong programming skills ) events, join a project. Detecting stuff in images of tissues.. that 's where you work and have n't visited this page in.. Command line environment as that 's going to do abstract data manipulation, and the job too many at! The wet lab does do a masters on the other answers but let me provide a little different IMO! Of work with molecular pathways and build graphs, others work on biological datasets to gain into! Is almost always more than the application of information technology to the next stage subreddit to discuss intersection... The molecular level computational docking say you must love programming in order to succeed the! Come in efficiently target adds to customers core mission: training the next stage or mathematician a programming/scripting and!.. that 's not developing pipelines, but chances are you applying for Graduation or post Graduation lot more that!

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